Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015866089.1_cds_XP_016432595.1_28822
CDS Infomation

[gene=LOC107759222] [db_xref=GeneID:107759222] [protein=U1 small nuclear ribonucleoprotein 70 kDa-like isoform X2] [protein_id=XP_016432595.1] [location=complement(join(50988..51475,51590..51729,51917..51985,52590..52737,52818..52899,54435..54497,54573..54637,54731..54806,55441..55520,55604..55718,56592..56687))] [gbkey=CDS]
Sequence

ATGGGAGATTTCAACGATGCCTTCATGCGGAACAACCCTAATGTCCAGGCCCGTGCAAAG
GCTCAGAATCGCGCTAATGTTATGCAACTCAAGCTGATTGGTCAAAGTCATCCAACTGGG
TTGACGGCTAATCTTCTGAAACTGTTTGAGCCCCGACCGCCTTTGGAGTACAAACCACCT
CCCGAGAAGAGAAAATGCCCTTCATATACAGGGATGGCACAATTTGTTGGTAACTTTGCT
CAGCCTGGCGATCCAGAATATGCTCCACCGGTCCCTGAGGTTGAAACCCCGGCTCAACGA
AAAGCTAGGATCCACAAGATACGGCTGGAGGAGGGTGCTAAAAAGGCTGCTGAGGAGCTT
GAGAAATATGATCCTAGCAGCGATCCAAATGTTACTGGAGATCCATACAAGACACTCTTT
GTTGCTAGACTTAATTATGAGACAACAGAAAGCAGAGTTAAACGTGAATTTGAGGCTTTT
GGTCCAATCAAGCGGGTTCGTTTGGTTACGGACAATACAAACAATAAACCCAGGGGTTAT
GCTTTTATTGAGTATGTTCATACACGGGATATGAAAGCTGCATATAAACAAGCTGATGGA
AAGAAGATTGATAATAGAAGAGTTCTGGTTGATGTTGAACGTGGGAGAACAGTCCCCAAT
TGGCGTCCCCGAAGACTTGGCGGTGGACTTGGAACAACAAGAGTTGGAACTGAAGATGTT
AATAGAGAGGTAGTTCAGATTGGAAGGGCGGCATCTCGCTCCGAAGAGCCAAGAGTACGA
GATGACAGAGAAAGGGATCGGGAGAAGTCCCGTGATAGGGTGCGAGATAGAGAAAGAGAA
AAATCTCGTGAACGTTCACATGATAGGCCAAGGGAACGTGACAGAGATGACAAACATCAT
AGGGAACGCGAGAGAACTAGGGATAGAGAAAGAGATCGTGGACGAGACCGCGATCGAGAC
CGTGAACGTGACAGGACACGTGACCGCGAACGGGGCAAAGATAGGGACCGTGAGCGGGAT
CGCCACCGTGAGAGGGATAGAGAAAGAGGTAAGGACTATGAAGGTGAGGTGGACCAGGGT
CGTGGGCGTTCTCGTGATAGAGAATATGATTATGAGCATGGTGAATCAAAACATGAGCGG
GAAAGACATGGCGACAGAGAAAGGAACTATGATCCTGCAGAACCTGAAGATGATCATGGA
CATTATGACCATTATGATCAACATAAAGGTCGAGGAGACTATGAGAATCCAGATGCTCAA
GCTGGTGATGATCGCTATAAAGATGCCAGTCATGTTGATGATCGTTATGATCAAATGGAG
GAGGATAATTATGCTTATGACCACGGGGCATCTGAGGCAAAAGAAAAGGACCGTGATCAT
AGGCGTTCAGATAGGTCACATTCTCGTGAATATGACTACTGA

Peptide Sequence

PEP ID

XP_016432595.1
PEP Infomation

PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform X2 [Nicotiana tabacum]
Sequence

MGDFNDAFMRNNPNVQARAKAQNRANVMQLKLIGQSHPTGLTANLLKLFEPRPPLEYKPP
PEKRKCPSYTGMAQFVGNFAQPGDPEYAPPVPEVETPAQRKARIHKIRLEEGAKKAAEEL
EKYDPSSDPNVTGDPYKTLFVARLNYETTESRVKREFEAFGPIKRVRLVTDNTNNKPRGY
AFIEYVHTRDMKAAYKQADGKKIDNRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGTEDV
NREVVQIGRAASRSEEPRVRDDRERDREKSRDRVRDREREKSRERSHDRPRERDRDDKHH
RERERTRDRERDRGRDRDRDRERDRTRDRERGKDRDRERDRHRERDRERGKDYEGEVDQG
RGRSRDREYDYEHGESKHERERHGDRERNYDPAEPEDDHGHYDHYDQHKGRGDYENPDAQ
AGDDRYKDASHVDDRYDQMEEDNYAYDHGASEAKEKDRDHRRSDRSHSREYDY

Transcript Sequence

Gene sequence data has not been registered.